Hi, sorry for this very late reply. And nope, you don't need to read them in order while watching the show, they are designed to be read independently, that said, many of our stories are unfinished though.
Hi, sorry for this late reply. And I'm sorry too about this, but we have yet to complete many of the longer stories. Our idea is that each season would read as a limited series, but again, many episodes are still incomplete and other are only plotted or scripted. That said you can still read many of our stories as the ones that are completed can be very well read as selfcontained tales.
All of the ones in the "One Page Stories" folders are obviously complete, and also complete are: Round Table, Worship the Mighty, Make Way for the New, BotScouts, Stinging Pride, The ties that bind, Attack of the D.I.A.clones, Scrambling Cores, Innocence Lost, Breaking In, Solaris, Much ado about nothing, The MonsterQuest, They were Titans, The Textbook, The eye of the Beholder, A Gordian Knot, Outrageous Disguise, The Devil's Gift, Checkmate, and Everything Old Is New Again.